Authoring
Citation Software
Zotero: Your personal research assistant. Entering grad studies and beginning many weeks of reading this has revolutionized my life.
Better Bibtex for Zotero keep an always up to date .bib file for integration with LaTeX or Rmarkdown citation.
LaTeX
I’m not totally convinced that I want to commit to LaTeX as Rmarkdown and bookdown do such nice jobs of it. That being said it is a great fallback.